Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAERANDIRPGQVLEHNGGLFLVVSIMHTQPGK-GGAYIQAEMKNIKTGAKLYERFRSDATIRRAILDEEEYIYLFTEGNIVNLMHPSNYEQ--ITINLDLLEEK-KIYLQDNMRIKVVTYQ--DKIIFAHVPDYVRLTVKETESFIKGQTITSSYKPAVLENGMRINVPQFIKEEDKIVVYTPDDSYYERVKE
3ER0 Chain:A ((19-146))
YPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDIDDGFLSLMNMDGDTKDDVKAPEGELGDSLQTAFDEGKDLMVTIISAMGEEAAISFKEAARTD-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ER0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44814 for 738 contacts (-60.7/contact) +
2D Compatibility (PS) -13114 + (NN) -2613 + (LL) 4308
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -60383.0 ( -81.82 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_3ER0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ER0-query.scw
PDB file :
Tito_Scwrl_3ER0.pdb
: