Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDT-----VITEEIIEHAKYYVKHKSHISEYP--GGLESEKQVLTKILGFLEGKFNNMQLDSDLVDKPAT---------LNQAVDEADDE-----QLQSPEPKSADGC |
| 2B8A Chain:A ((1-110)) | MSRSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQSSQKKSCAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17925 for 473 contacts (37.9/contact) +
2D Compatibility (PS) -9492 + (NN) -3445 + (LL) 0
1D Compatibility (HY) -800 + (ID) 600
Total energy: 3588.0 ( 7.59 by residue)
QMean score : 0.218
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