Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEFEIEPLLKDKVPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRVAEGTGFPHYILNYEEIFKKEVIESFAQTYIQGKTPIPCIKCNQTVKFRDLLQ-VTRNLGADVLITGHYVRRLEKNGEVKLCRGIDKSKDQSYFLFATTKEQLKLLRFPLGGFYKCNVRKLARYFSLPISEKPDSQDICFVSEN-YSKTIAKLAPQSIQKGKIVDVNGKVLGEHNGIVNFTVGQRKGLGIAYS-----EPLYVVRINTKNNEIVVGPVNA---LMQRKILVKELNWLE-QPKKG-MEVTVKLRSLHSGSLAKIYPAKEQNKAYVILNDDYFSISPGQACVAYKDEQVIGGGWICS |
| 2DEU Chain:B ((19-372)) | -------------------KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEE-----YCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPA--QPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQT-DIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221284 for 2831 contacts (-78.2/contact) +
2D Compatibility (PS) -36367 + (NN) -3018 + (LL) 1740
1D Compatibility (HY) -25600 + (ID) 6800
Total energy: -291329.0 ( -102.91 by residue)
QMean score : 0.384
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