Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEACKTCEESQR---------ELERELENLESQLSAVEKEKEDLENESAELQKQVQTLKEDKKMCKKD
1L8D Chain:A ((48-104))
--GKCPVCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEIKRL----------
General information:
TITO was launched using:
RESULT:
Template:
1L8D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9333 for 175 contacts (53.3/contact) +
2D Compatibility (PS) -5440 + (NN) -5872 + (LL) 848
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -5231.0 ( -29.89 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_1L8D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L8D-query.scw
PDB file :
Tito_Scwrl_1L8D.pdb
: