Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSVSIMDLIPIQRGPKNWLKDKGEEILNLVRNYKKISDQKLRKIFYLLIKSAQLSKKSSRKVEIIEIAKNLFKAGISINIISQITGLSTDRIA
1Q08 Chain:A ((6-28))
-----------------------------------------------------------------LKFIRHARQLGFSLESIRELLSIRIDPEH
General information:
TITO was launched using:
RESULT:
Template:
1Q08.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10561 for 102 contacts (-103.5/contact) +
2D Compatibility (PS) -2451 + (NN) -218 + (LL) 5312
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -9668.0 ( -94.78 by residue)
QMean score : 0.833
(partial model without unconserved sides chains):
PDB file :
Tito_1Q08.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q08-query.scw
PDB file :
Tito_Scwrl_1Q08.pdb
: