Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKILIVNSIYYTEIANLLLEGATDKLKGSNASYNVIEVPGAFEIPAAILFAVKSKH---FNYDGYLALGCVIRGETDHYQYICKGVIKGLNEVVMHNTVPLGMGVITADSKDKALVRADKDKKNIGGRTASAVLHMIDLYNKLR
2O6H Chain:E ((15-155))
---LLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALGTVIRGETYHFDIVSNESCRALTDLSVEESIAIGNGILTVENEEQAWVRARREDKDKGGFAARAALTMIGLRKKFG
General information:
TITO was launched using:
RESULT:
Template:
2O6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124228 for 1126 contacts (-110.3/contact) +
2D Compatibility (PS) -15013 + (NN) -9262 + (LL) 244
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: -163409.0 ( -145.12 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_2O6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6H-query.scw
PDB file :
Tito_Scwrl_2O6H.pdb
: