Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSDARSISYMSDIISIASDHAGYELKSEIKSYLETLGCKVLDRGCTAEQKCVDYPDYAVKIAEDIINKKADYGILICGTGLGMSIVANRFKGIHAVLCNSVEITKLAREHGNANVLCLGARFTASGLAKDIVKQFLETEFSKESRHKRRLDKLSNIASFSKRKKVQTYNEDEVSKFAKMVGEWWDENGKFKPLHMMNPVRVSYIIEKIKELKKCDLKKLSLLDVGCGGGILSESIARVGINVLGIDVCEENIKVAQSHAKKVGLNIEYTHTSIEELSNNQKYDVVLLMEVVEHVDNLELFIKKAIELLKPEGLIFISTINRTFKSFFLAIIGAEYILNWLPKGTHNWNKFLKPSEIANHLREGNVTLQDMAGMEYNIIKSEWNLTKGVDVNYILCGVMNS |
3PH4 Chain:B ((23-163)) | ---------------IGIGSDHGGYNLKREIADFLKKRGYEVIDFG-THGNESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEF-QGGRHATRVGKIGEIEKKYS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115729 for 1194 contacts (-96.9/contact) +
2D Compatibility (PS) -15377 + (NN) -6355 + (LL) 18948
1D Compatibility (HY) -13600 + (ID) 3250
Total energy: -135363.0 ( -113.37 by residue)
QMean score : 0.602
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