Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNGTVNKVILVGNLGRNPEIRTMQNGKEMANFSIATSEGWTDKFSGVRSEKTEWHNIVIFSEGLVKVVKDFVRKGSKVYIEGSLKTRKWTDQNGSERYTTEVVLQNFNGTLTLLDSRNNAASSDYKSNEYKQDETGQKDQYENFDSEVKEELIDDEIPF
3PGZ Chain:B ((24-136))
---GSLNKVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTEWHNIVIFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQNGNDRYTTEIVLQKYRGELQMLD--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PGZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50277 for 712 contacts (-70.6/contact) +
2D Compatibility (PS) -12121 + (NN) -1667 + (LL) 1972
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -79193.0 ( -111.23 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3PGZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PGZ-query.scw
PDB file :
Tito_Scwrl_3PGZ.pdb
: