Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNKYYDSNNIFAQILRGELPCKKVYEDEDVLAFYDKYPDAPVHILVVPKSQYISYDDFIFKASAEEIVGFFKTV-REITYKYNLEKTGYRLVTNCGENGEQVVPHFHMHILGGKRLGKHVNL
4EGU Chain:B ((7-111))
----------IFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEM--DIVSHIHVVINKIAKEKGFDQTGFRVINNCGSDGGQEVKHLHYHILAGKKLPNYE--
General information:
TITO was launched using:
RESULT:
Template:
4EGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75865 for 717 contacts (-105.8/contact) +
2D Compatibility (PS) -11190 + (NN) -7854 + (LL) 224
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -106035.0 ( -147.89 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_4EGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EGU-query.scw
PDB file :
Tito_Scwrl_4EGU.pdb
: