Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRVGINGLGRIGRSVLRAIHEVGKYNEQIEVVAVNGSLSTEQHAHLIRYDSVHGKFNGDIGFNESENWISTNGKKFSLYRERNPENIPW---DVDVVLECTGAFNKRAEAAKH---NTGKVIVSAPVSDADITIVYGVNNDMLKKEHKVISAGSCTTNCLAPVVKVLHFNLDMKSGFMTTVHAYTNDQNVLDGNHRDLRRARACGLSIVPTTTGAAKTIGSVIPELKGKLDGTAIRVPVANVSMVDLKFTTDKKVTAKEINEIFKN----SVNDVLSICKEPLVSIDFVHNPYSAIVDLAGTYVT-GDICRVAAWYDNEWAFSLRMLDIALLCYNRI
3L0D Chain:B ((22-350))MSVRVAINGFGRIGRNILRAIIESGR--QDIEVVALNDLGSVETNAHLLRYDSVHGCFPGTV--QVVGDAIDI---LIKVFAERDPAQLPWKALDIDIALECTGIFTARDKASAHLDAGAKRVLVSAPSEGADLTVVYGVNHQFLSKEHHVISNASCTTNCLAPVAQVLHNTVGIEKGFMTTIHSYTGDQPVLDTMHRDLYRARAAALSMIPTSTGAAKAVGLVLPELKGLLDGVSIRVPTPNVSVVDLTFTAKRSTTIEEINTAIRTAAQGSLKGILDYTDEKLVSCDFNHNPHSAIFHNDQTKVIDGQLCRVLVWYDNEWGFSNRMCDTAVAFAKTI


General information:
TITO was launched using:
RESULT:

Template: 3L0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -240950 for 2709 contacts (-88.9/contact) +
2D Compatibility (PS) -32892 + (NN) -3463 + (LL) -216
1D Compatibility (HY) -30800 + (ID) 8750
Total energy: -317071.0 ( -117.04 by residue)
QMean score : 0.517

(partial model without unconserved sides chains):
PDB file : Tito_3L0D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L0D-query.scw
PDB file : Tito_Scwrl_3L0D.pdb: