Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAVVKELAHPLFSAAGIDDNWIRVFIINDNSINAFVINNNSIFIHLGLLQYSTEPYALLSILAHEIAHISAGHISQMSSAVGYFQSIAIVSYMVGLISTIIINPQIASAILLSGMTLSSRLFFNYSQEQESVADSYALKYLDESGYDNLGMKEVFDYFRGIEHENAEGYFRTHPLSSKRIFAVQNYKVKNEVKPILVDKLLRFKRMVAKLDSFFSPIHVLSNKYEDNSEYVSAVIYYRQGKIKKAIAKVNSLIQESSNDPYLYELKAEMLYKTGNLNEAVKMYEESLKYLSEKNSYLVKLALSHALLLYGDIKKAIFHLEQIVSVEPNNAFVWKHLGIAY--KCDANIAMHYFALTKKACIEGNLKQFVKYAELAVRNLPKDSPYLLQIEDMKRFNE |
1NA0 Chain:B ((20-100)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YKQGDYDEAIEYYQKALE--LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39065 for 549 contacts (-71.2/contact) +
2D Compatibility (PS) -9029 + (NN) -9377 + (LL) 23268
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -39103.0 ( -71.23 by residue)
QMean score : 0.611
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