Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGN--SIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3MBQ Chain:C ((34-172))
------------IIRLEHAKGLDLPAYETAGSAGMDLRAAVAEDRQIVLLPGRRTLVPTGLILEIPQGYEVQIRPRSGLAFKNGITCLNTPGTIDSDYRGEVKVLLINLGDDDFRIERGMRIAQAVFAPVIQPKIE--ERAKI-----GAGGF-----
General information:
TITO was launched using:
RESULT:
Template:
3MBQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77688 for 867 contacts (-89.6/contact) +
2D Compatibility (PS) -13927 + (NN) -1420 + (LL) 1340
1D Compatibility (HY) -11200 + (ID) 3950
Total energy: -106845.0 ( -123.24 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_3MBQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MBQ-query.scw
PDB file :
Tito_Scwrl_3MBQ.pdb
: