Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEVGAGTLHPATIMSAIDVKPTKIAYLQPVVRPADGRYGDNP---NRLYQHHQYQVIIKPSG---------NNLQDVYLSSLRALGISTEKYDIKFIEDDWENPSVGASG---LGWEVTCN----GMEVTQLTY---IQ--QIG-------SINCRIIPGE-VAYGLERLAMCIQGVNNVYDIIWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 1SES Chain:A ((243-391)) | --------------------------------------------ALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELPYR---LVEVAT----GDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYMGKEVLEPCG--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37461 for 700 contacts (-53.5/contact) +
2D Compatibility (PS) -12888 + (NN) -3016 + (LL) 9428
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -47737.0 ( -68.20 by residue)
QMean score : 0.297
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