Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIISLNNNSCSVEIKKKLLSIITKVIEKNTWTQAHAAERLGVDQPKISQIKNGKTDGFSLERLLGFLKKFDHEITITITESQAVKPETEKVKREVGSP
2B5A Chain:A ((7-74))
--------------IKRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRN-ISLINIHKICAALDIPASTFFRKMEEEN-------------
General information:
TITO was launched using:
RESULT:
Template:
2B5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26550 for 477 contacts (-55.7/contact) +
2D Compatibility (PS) -7431 + (NN) -4309 + (LL) 1988
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -40152.0 ( -84.18 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2B5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5A-query.scw
PDB file :
Tito_Scwrl_2B5A.pdb
: