Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIFAFPGQGSQFVGMGRDLYSQFSVAKQVFDEVDSILGRKLSHLIFNGPVEELTITENAQPAITAVSIATLRVMEHVFGKSLLSDHDVKYVCGHSVGEYTALCAAGALTLESTVKLLKARSEAMHKASLKCKGGMVALLGAEISEVEDILESAQIDEIYGIANDNGGGQVVVSGTAEALEILPGLFKNSSVRKLIKLQVSGPFHSSLMRPADEKILEFLESIDITHPSIPFVSNVTAKEESNPETIKILLAKQIVSRVKWREMVLHMASSGINEFVEIGPNKVLSNLVKRIDQSISTKNIGSISDIDSFFNRSPVLTVENLEVSLS |
3QAT Chain:B ((9-311)) | --FTFPGQGSQLIGMGKVLTEQFVAARMVFEEVDDALSEKLSDIIFEGPADVLTLTANAQPALMAVSMAVIRVMEQL---GLNVEKKVKFVAGHSLGEYSALCAAGTFSLTDTARLLRIRGNAMQAAVAVGEGSMAALIGLDEKDVEEICEIVAEEGLCQIANDNGGGQIVISGEAKAVETAVEVASQKGAKRAVLLPVSAPFHSALMQPAANAMKNALLTVNKTAPIVPLIANVSVIPESDPERIVSLLVQQVTGRVRWRETIEWISANGVNTLFEIGSGKVLTGLARRINKDIKALTVGTAEEIEAALRVLGV----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -201362 for 2783 contacts (-72.4/contact) +
2D Compatibility (PS) -32811 + (NN) -17988 + (LL) 1268
1D Compatibility (HY) -22800 + (ID) 6800
Total energy: -280493.0 ( -100.79 by residue)
QMean score : 0.562
|
|
|