Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFKSVVLCILDGWGNGIGDSKYNAISNANPPCWQYISSNYPRCSLSAC--GTDVGLP-DGQIGNSEVGHMNICSGRVVMQSLQRIDREIKTIE--NNKNLRSFISDLKDKNGVCHIMGLVSDGGVHSHQKHI-STLANKISQHEIKVVIHAFLDGRDTLPNSGKKCVQEFEENIK-----GNDIRIATVSGRYY-AMDR-DNRWERTIETYEAIAFARATCHNNVMSLIDNNYQN--NITDEFIRPTVIGDYKG-----IELKDGVLLANFRADRMIQLASILLGKTGYTEVAKFSSI-------LSMMKYKEDLQIP--CLFPPAFFTNTLGEIIADNKLRQLRIAETEKYAHVTFFFNCGKEEPFSNEERIL--IPSPKVETYDLQPEMSAFELTEKLVGKIRSQEFTLIVANYANPDMVGHTGNMEAAKKAVLAVDDCLAKVLNTVKEINDAVLIVTADHGNVECMFD-----------EKNNTPHTAHTLNKVPFIIY-----PNSCNNLKLKDGRLSDIAPTILQLLGIKKPDEMTGSSLIV |
| 3NVL Chain:B ((34-562)) | ---RKLVLVVLDGVGIGPRD-EYDAVHVAKTPLMDALF-NDPKHFRSICAHGTAVGLPTDADMGNSEVGHNALGAGRVVLQGASLVDDALESGEIFTSEGYRYLHGAFSQPGRTLHLIGLLSDGGVHSRDNQVYQILKHAGANGAKRIRVHALYDGRDVPDKTSFKFTDELEEVLAKLREGGCDARIASGGGRMFVTMDRYEADWSIVERGWRAQVLGEGRAFKSAREALTKFREEDANISDQYYPPFVIAGDDGRPIGTIEDGDAVLCFNFRGDRVIEMSRAFEEE----EFDKFNRVRLPKVRYAGMMRYDGDLGIPNNFLVPPPKLTRTSEEYLIGSGCNIFALSETQKFGHVTYFWNGNRSGKLSEERETFCEIPSDRVQ-FNQKPLMKSKEITDAAVDAIKSGKYDMIRINYPNGDMVGHTGDLKATITSLEAVDQSLQRLKEAVDSVN-GVFLITADHGNSDDMVQRDKKGKPVRDAEGNLMPLTSHTLAPVPVFIGGAGLDPRVQMRTDLPRAGLANVTATFINLMGFEAPSDYEPSLIEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275281 for 4216 contacts (-65.3/contact) +
2D Compatibility (PS) -51034 + (NN) -12280 + (LL) 204
1D Compatibility (HY) -32000 + (ID) 8450
Total energy: -378841.0 ( -89.86 by residue)
QMean score : 0.511
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