Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLP-GNIELNSNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCKSRLPIHGEY---TVAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTSKK---------HVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY
1MO0 Chain:B ((25-263))
--FFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPD-FVKIINARS---
General information:
TITO was launched using:
RESULT:
Template:
1MO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127425 for 1858 contacts (-68.6/contact) +
2D Compatibility (PS) -23955 + (NN) -7589 + (LL) 712
1D Compatibility (HY) -16400 + (ID) 4400
Total energy: -179057.0 ( -96.37 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_1MO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MO0-query.scw
PDB file :
Tito_Scwrl_1MO0.pdb
: