Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGINNFMNEVLFFKIFYVPFIILLVAFGYIFLTLRFKFLNIRMFKHAFTILCGKYDTDHHDGHITHFQAFVIALSSTVGLGTVAGVAIAVSMGGPGAIPWMMITGFFGMSAKFAEVTLAFRHRTEGQEQLFSGPFQYIRNGLEEFGFKKLGIILAAVYAVFFVLSGLGGSVAFQTNQMVSILSGYSNWVDSHPWFLSSIISALLALVIIGGIRRIARVSSALVPVMSLIYIFSCITIITFNIHNFSNVFKILFSNMIDFNAVGGGVVGAFVAGIQRAIFASEAGVGSASITHAVAKDEEPVRTGLVAMIEPCFDTMLICCLTGITIVITGAYQTGIGEGILVTQKAFETVSSWFPIFLIIAAPLFAFSSVISFVYCCEMGWLYLFGAKSIVIYRIAVVVVAFFSGLSKDIMAIANIGGTLFSCLALINMTALILFSSQINDEVQCYSKRLRNNKIN |
| 3B9W Chain:A ((8-369)) | -INEARLVAQYNYSINILAMLLVGFGFLMVFVRRY----------------------------GFSATTGTYLVVATGLPLYILLRANGIFGHALTPHSVDAVIYAEFAVATGLIAMGAVLGR--------------------LRVFQYALLALFIVPVYLLNEWLVLDNASGL---------TEGFQDSAGSIAIHAFGAYFGLGVSIALT--TAAQRAQPIESDATSDRFSMLGSMVLWLFWPSFAT---------------------AIVPFEQMPQTIVNTLLALCGATLATYFLSALFHKG-----KASIVDMANAALAGGVAIGSVCNIVGPVGAFVIGLLGGAISVVGFVFIQPMLESKAKTIDTCGVHNL--HGLPGLLGGFSAILIVP--------GIAVAQLTGIGITLALALIGGVIAGALIKLTGTTKQAYEDSHEFIHLAGPEDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -412297 for 3424 contacts (-120.4/contact) +
2D Compatibility (PS) -36369 + (NN) 5960 + (LL) 7724
1D Compatibility (HY) 4000 + (ID) 1900
Total energy: -432882.0 ( -126.43 by residue)
QMean score : 0.244
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