Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDLTRVANLIKKDV---DKGYRIIVVVSAIAGLTDQMVFQARQTLNLSHKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIKIDHLKRSFAEGYTVAIIAGFQGIYDDRITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKEVEGTAVLH--ENDVLERHTITGITYSTNEALITFTNFAN----TLRTLKDMAGANIKIDMI--HGSSIVISEFDI-------------DLMKELLNKNE--DYVINNNAAKISIIGIGVMSVMYHTLKF---FSEKKIEILAITASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 3AB2 Chain:O ((3-405)) | -------------------LVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAR---EMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQAGVLT------------TPGRVREALDEG-KICIVAGFQ----------GRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMEDIPVEEAVLTGVATDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVQGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQLGGED |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -262230 for 2823 contacts (-92.9/contact) +
2D Compatibility (PS) -38057 + (NN) -13443 + (LL) 2872
1D Compatibility (HY) -24400 + (ID) 6250
Total energy: -341508.0 ( -120.97 by residue)
QMean score : 0.523
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