Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIGSPVILAPMSGVTDYPFRSIVKKLGASL-LVSEMIASRAMIMQTRQSMQKAKVDELT-AVQLAGCEPDIMAEAAKLNEDMGAKIIDINFGCPVKKVVNGYAGSALMRNEKKAAEIIEAVVKAVNVPVTVKIRTGWNNEN--RNAPRLAKIAEDLGAKMITVHGRTRAQLYNGQA---------DWKFIRNVKEQV-KIPVIVNGDIKSLNDIQNALKESRADGVMIGRGAYGRPWLINQAINFLSGSEVSEPTASEKLSIILEHYDNILEYYGNDAGIKIARKHIGWYSSGFKNSSEFRVRVNNMTDSMEVKENIVSFFSQV |
3B0U Chain:Y ((2-238)) | -LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDW--VHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLME------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148102 for 1848 contacts (-80.1/contact) +
2D Compatibility (PS) -24250 + (NN) -10084 + (LL) 684
1D Compatibility (HY) -14000 + (ID) 3750
Total energy: -199502.0 ( -107.96 by residue)
QMean score : 0.524
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