Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVKKNRINEFITAKEVRLVDHNGEMVGVVSIGRALTFAQNVGLDLVEVAPDSIPPVCKILDYSKQKYDAKKKASEAKKKQKTLTIKEIKLGPNIGDHDYETKLRHARDFLTHGHKIKVTMKFKGRELINTEVGLEKLERLIRDTEDIAKIESAPK-REGNQYFLALTTK
2IFE Chain:A ((90-177))
----------------------------------------------------------------------------------VIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPK
General information:
TITO was launched using:
RESULT:
Template:
2IFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16140 for 629 contacts (-25.7/contact) +
2D Compatibility (PS) -9525 + (NN) -4203 + (LL) 6108
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -32660.0 ( -51.92 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2IFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IFE-query.scw
PDB file :
Tito_Scwrl_2IFE.pdb
: