Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINWQAKDPEGNSINCSMTVKVGSGGIQSATGGFGVSKFKSPLPEGKKSEILK-LVEQNKEVFISGKTLYKAFTDVGQSVDD
2KWV Chain:A ((491-526))
--------------------------------------LPLQALPEGVDQEVFKQLPADIQEEILSGKSRENLK---------
General information:
TITO was launched using:
RESULT:
Template:
2KWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7594 for 183 contacts (41.5/contact) +
2D Compatibility (PS) -3596 + (NN) -1611 + (LL) 1192
1D Compatibility (HY) 0 + (ID) 550
Total energy: 3029.0 ( 16.55 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_2KWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KWV-query.scw
PDB file :
Tito_Scwrl_2KWV.pdb
: