Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVILKENIRTLGKLGEIVKVKPGYARNFLFPQRKAVKATKESIAKLEEQRSFLEEENIRKLNLASELAASFAGKFVILVKQASEDGKIFGSVTTREVARSLSQEYEVDHRKISFNGVKIRNLGEYQASIEFHSEIVVQVAVHVVRSETDAHELRQVKSQSQKSQQQEAKQNEVGEATDSDKADQK
2HBA Chain:B ((1-51))
MKVIFLKDVKGMGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQ--------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22945 for 320 contacts (-71.7/contact) +
2D Compatibility (PS) -5132 + (NN) 981 + (LL) 10748
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -22298.0 ( -69.68 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_2HBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HBA-query.scw
PDB file :
Tito_Scwrl_2HBA.pdb
: