Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNRSTDTKRKEMIELKGPEICTDRSRENLIVCLHGRGSSGNNFVHLAKVMSKSLPNSCFVAPNAPSKREIGNGYQWFSLEDRSEEVLYNGVKNAASIVNHFIDTKLKEFSLKDTQLSLVGFSQGAMLAIHTALTRPQCCASVVAYSGKFLSPSRVAPKIKSRPNVCVIHGDADNVVPFSFFDLTVKALKENGVNVEGYPIRTLGHLINKEGIKLGVEFIKKNFKK
3B5E Chain:A ((27-216))
------------------------KESRECLFLLHGSGVDETTLVPLARRIAP---TATLVAARGRIPQE--DGFRWFERIDPT-RFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV-PATDLAGIRTLIIAGAADETYGPF-VPALVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVRQWLAGP---
General information:
TITO was launched using:
RESULT:
Template:
3B5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110254 for 1571 contacts (-70.2/contact) +
2D Compatibility (PS) -20549 + (NN) -14302 + (LL) 2300
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -150605.0 ( -95.87 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_3B5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B5E-query.scw
PDB file :
Tito_Scwrl_3B5E.pdb
: