Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKLNQPIALAQKVSVDDCNFTSKEDVVINLNEMDIIFIRQDPPFDMRYITTTYILEKTRALVINNP-TEMRNCPEKLITSLFP----ELIPPTLITENISMIR-DFYHDYR-GIILKPLYSYGGNDVIRIQNENSIQVVVELMITKYKCPVIAQAFCKNVNKDKRILLLDGQPIGVM-KRVPRVSGEIRTN--LRLGASF-EPVEMN----DRDNEICNKIGPELKKRG-LIFVGIDIVDD----FLLEINITSPTGVV----YINKLYNTSLEKDLWNTFEEKASSHISQPSL |
| 3R5X Chain:A ((24-298)) | -----------GNEMIANLDKNKYEIVPITLNEKMD-----------------L-------IEKAKDIDFALLALHGKYGE-DGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLGFPLVVKPNS----VGVKIVYDKDELISMLETVFE-WDSEVVIEKYIKGE--EITCSIFDGKQLPIISIRHA--AEFFDYNAKYDDASTIEEVIELPAELKERVNKASLACYKAL---KCSVYARVDMMVKDGIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLL-DMIIETSLRVRKEEG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129586 for 1762 contacts (-73.5/contact) +
2D Compatibility (PS) -26128 + (NN) -2626 + (LL) 2752
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -165238.0 ( -93.78 by residue)
QMean score : 0.305
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