Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNTDQQQGLDSKEKSSEDLKPEKKREMKEAAAELKEGIKKSGAGNQSVGTEVSNQATTQDIDNSKTMEH
3ZLJ Chain:C ((23-53))
-----SPAVEALENLDPRSLTPRQALEWIYRLKSLV----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11608 for 135 contacts (86.0/contact) +
2D Compatibility (PS) -3357 + (NN) -1825 + (LL) 1416
1D Compatibility (HY) -800 + (ID) 200
Total energy: 6842.0 ( 50.68 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_3ZLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZLJ-query.scw
PDB file :
Tito_Scwrl_3ZLJ.pdb
: