Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVEIISNFLFDKIKNKQISGVTVNNWNLRVPITQNIDDVIKGKVINNIKRRGKYIIWHIDNDIVVTVHLGMSGKLIYAKGEQAQNKHDHVIFSFSDNTSIIFNDPRKFGLVIILNKEQEVNFFNDFGIEPFTDEFNGDYLQKLLKSKKVNIKSALMNNKLIVGIGNIYASESLFRARISPLRSAQDLTYKECEKLATEIKNTLSDAIIAGGSTLKDYAQPSGSVGYFQNSFYVYGKVQKPCKICNNTITLIRQNGRSTYFCNACQN |
| 1K82 Chain:D ((1-268)) | -PELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLS-VQRRAKYLLLELPEGWII-IHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK--------PGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1K82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148469 for 2142 contacts (-69.3/contact) +
2D Compatibility (PS) -28213 + (NN) -13880 + (LL) 92
1D Compatibility (HY) -21600 + (ID) 5200
Total energy: -217270.0 ( -101.43 by residue)
QMean score : 0.526
|
|
|