Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKDLILLGIASVIGALTGLWLSFTALSHLIIGGVIAAIPVMLLSA-YYICDSIRKGKFSKKDLFESYLCMLH-KCHDWSWSCCNRNCFFPGAMIGIGYATLAGGAIAPIIAIFPMYSIIVPIAEKVNEYIIFP-IIEYFSLKGKEHEQV
4RS7 Chain:A ((1-87))
-------------------------------------ADLESLYRAMPSIKKLVDEGKLTEKDAEKVYEIWRNME-------------------------AIYKQASLLWYNTVDLLLKRIGLSEKEREEIFYEMVRPYFRLFSREEVF-
General information:
TITO was launched using:
RESULT:
Template:
4RS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13378 for 406 contacts (-33.0/contact) +
2D Compatibility (PS) -7898 + (NN) 2146 + (LL) 4240
1D Compatibility (HY) 2400 + (ID) 400
Total energy: -12890.0 ( -31.75 by residue)
QMean score : -0.093
(partial model without unconserved sides chains):
PDB file :
Tito_4RS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RS7-query.scw
PDB file :
Tito_Scwrl_4RS7.pdb
: