Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASAIRFLSIDAVQKASSGHPGMPLGMADVATVLFAQYLNHNPDDPKWVNRDRFVLSNGHGSMLLYSILYLTGY-ISIDELKNFRQLTSKTPGHPEFGLTPGVEATTGPLGQGFAVAVGMALAESILKNQFG------INHYTYVMLGDGCLMEGISHEAASLAGHLKLNKLIALFDDNDISIDGATHLSCSDDAEKRFSAYGWNV-NKIDGHDFNSISLAIEQARKSDKPTLICCKTIIGK-FSNRAGASSAHSGAFTEEDVKQMREKLNWNYVPFHVPKDVKNAW--METVERAKQNYNSVSFQRQALEPSENKELQRRLDKRLPDNIDDDLANLKKQIHETMPNEATRSSFGKVMELLTESMPELIGGSADLTGSNCTKYKHMKVIDNNNYS-----GSYVHYGVREHAMAACMNGMALHGGILPYGGTFLVFSDYCRPAIRLSALMKQQVIYVMTHDSIGVGEDGPTHQPIEHLASLRTVPNLYVFRPTDAIETLECISIALKKKESPALFALSRQNLGYMRKFHFNVDQSTNLSKSGAYVVCEYSEKL--EVTIFATGSEVEIAIETRKKLQEKGIGTRVVSMPCWRLFDEQSDEYKDAILNNDSIKVAIEAGSEIGWHKYIGSNGIFIGMKSFGESAPYKTLYEHFNINTDYVVKCVCEKLFISKP |
| 3UPT Chain:B ((48-705)) | MANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAKAKRSDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKTREALGWTWAPFVIPQEVYAAWDAKEAGKRSEDDWNAAFAQYRAKYPAEAAEFERRMAGTLPADWAAKAAAIVAGANERGETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRANADGPGVQWGNHINYGVREFGMSAAINGLVLHGGYKPFGGTFLTFSDYSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPADTVETAVAWTYAVAHQH-PSCLIFSRQNLA----FNARTDAQLANVEKGGYVLRDWDE--ARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGVTDFWRKYVGLEGGVVGIDTFGESAPAGVLFKHFGFTVEHVIETAKAVLA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -337678 for 5907 contacts (-57.2/contact) +
2D Compatibility (PS) -69750 + (NN) -36851 + (LL) 1092
1D Compatibility (HY) -48800 + (ID) 16450
Total energy: -508437.0 ( -86.07 by residue)
QMean score : 0.530
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