Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFEQIKKDITENDVVLYMKGTSDFPQCGFSGLVVSILKKLNVKFKYINVLENDEIRQSIKKFSNWPTIPQLYIKGEFIGGCDITREIYEKGELQSLLKEKKIVE
2WCI Chain:B ((23-122))
-TTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKY
General information:
TITO was launched using:
RESULT:
Template:
2WCI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74719 for 756 contacts (-98.8/contact) +
2D Compatibility (PS) -10973 + (NN) -4228 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -104862.0 ( -138.71 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_2WCI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WCI-query.scw
PDB file :
Tito_Scwrl_2WCI.pdb
: