Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIATWNVNSIRKRVDQLCSFIVDDQIDIILLQEIKCTEEQFPYVEIEKLGYECIVYGEVARNGVCVLSKHPILE-KFKIDIVEGYQEARYIECLIKHNNQKMRVVSIYVPNGQSLGSH-VFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLL------NGQVCFHIKEREKLKAILNLGFKDAFRMSHPNL-QQFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYIDDRLRKLENPSDHTPIVSIMEW |
1AKO Chain:A ((1-267)) | -MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151506 for 2162 contacts (-70.1/contact) +
2D Compatibility (PS) -27979 + (NN) -14016 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -209943.0 ( -97.11 by residue)
QMean score : 0.492
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