Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
1O2B Chain:D ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFD-----EERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYS-LSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDILKEV---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1O2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150142 for 1400 contacts (-107.2/contact) +
2D Compatibility (PS) -20699 + (NN) -1072 + (LL) 5604
1D Compatibility (HY) -19600 + (ID) 4700
Total energy: -190609.0 ( -136.15 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_1O2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O2B-query.scw
PDB file :
Tito_Scwrl_1O2B.pdb
: