Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNYFALFKIEPAFNISLDELEKKYIELSKTDINER---QSQNMENINKAYQVLKSPLKRAEHLLNLFGVRSQEDQHNFEILNESMEIREYLLDCNNLQLASGMIDEKIKDCIKNLTNNFAVKNFDEAAMQVLRLKYLYKSFEEIKNETNSNF
2OCH Chain:A ((4-66))
-ETGYYDVLGVKPD--ASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGG--------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7197 for 362 contacts (-19.9/contact) +
2D Compatibility (PS) -6338 + (NN) -2762 + (LL) 6740
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -12657.0 ( -34.96 by residue)
QMean score : 0.665
(partial model without unconserved sides chains):
PDB file :
Tito_2OCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OCH-query.scw
PDB file :
Tito_Scwrl_2OCH.pdb
: