Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPIQISEPNSNEVVFGIDLGTTNSLIAVVNKAGNVEIFTDEQGRELLPSVISY--ENNTL------KTGYDVDQNAIYPIKRLMGKSVEDLNKEGINLEIDNESEKIIRVKCSE------DKYLTPIEISAEILKALCERVKKSTGMEVRKAVITVPAYFDDSARNATKYAAKLAGIEVLRLINEPTAAALSYSIAKNNNSGIYAVYDLGGGTFDISILKLH----QGVFQVLAVGGDTKLGGDDFDHLLSMIILDKYRKKVGKDLNSLKHLSTKSRSIKEHLSKNISSTFEFNIN----------GELFKCKITKEEFEQTISSLVNKTINIVTHTISNIDLKIEDIEGVILVGGATRVPLVQSSLVKLFGNKVLNDVDPDKAVAIGAALQAHYLTSNSKDRNVLLDVLPLSLGIETMGGIVEKIIPRNTPLPVSETREFTTYIDGQTAIKIHVCQGEREIIEDNKSLAQFELKGIPQLPAGSARVEIEFIVNVDGILTVTAREKTTGIEQTVEINSSFGLSEADIQDMVNQSINNFDEDMKARSLAEAKINGNKLIH-----LVESNDNLSTDKN--LKNLLQNTKNALQGNDLNEINNAITELESFSLELCESTNK |
| 4JNE Chain:B ((4-596)) | --------------IIGIDLGTTNSCVAIMD-GTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQD---EEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDV-LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSMG----GAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224474 for 4613 contacts (-48.7/contact) +
2D Compatibility (PS) -60028 + (NN) -19364 + (LL) 960
1D Compatibility (HY) -37600 + (ID) 11300
Total energy: -351806.0 ( -76.26 by residue)
QMean score : 0.547
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