Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQPLVVVCHALTGNHLTYGTDDYPGWWREIIDGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHFPKKLTLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRTSSYSRAFNEIARQAIHLGGKEGLSIARQLGFLTYRSSKSYDERFTPDEVVAYQQHQGNKFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHIFKNLETKVLTMGFIDDLLYPDDQVRALGERFKYHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
| 3OM8 Chain:A ((12-266)) | ----------------------------SDGASLAYRLDGAAEKPLLALSNSIGTTLH---------MWDAQLP--ALT-RHFRVLRYDARGHGA-SSVPP-----GP-YTLARLGEDVLELLDALEVRRA-HFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAA-QWDERIAAVLQAEDM--SETAAGFLGNWFP-PALLE-R-AEPVVERFRAM----L-MATNRHGLAGSFAAVR-------DTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTL-P-AVHLSNVEFPQAFEGAVLSFLGA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214699 for 2255 contacts (-95.2/contact) +
2D Compatibility (PS) -27462 + (NN) -7952 + (LL) 1688
1D Compatibility (HY) -3200 + (ID) 1800
Total energy: -253425.0 ( -112.38 by residue)
QMean score : 0.505
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