Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSLKTVIGMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHVRRD-------HNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVID-HDADDNIVLYAISKDRHDYVKLTTT-TKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTISVEKMNAILFDDSTIVRSSKSGVTTYNNNTGVANYNDKNEKYHYKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGYPTFNKE-----GSNQIQVTWGEKGVFDYRRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDINFEKVTNIAIGYEMQDNSDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE |
2FGT Chain:A ((50-447)) | --------------------------------------------------------HKIEKTTQKLSETVRPRDMFIHDDG-AHYKVDDNALYEEIWSDLPHWDVKGIKDISDQYDKAGFKSWFYGIGGSEAKLDLQFSDTIPIDIFQ-TLFKWSNQSFEYSSFDHILIPFNETKANKKIYLVSYSKQLILEVTVESANYRNIMNDLKNRQSNMPA-----FSLFSIGSKKEFLLPNKPLTMDKKEFVTESIKTNTFKQALFSDPSIVRE-----NVLTDGISRLDVNLSQRQVQFQQLVQST--SYQTGELIKKSQKYLEDTGSWT-DHYQFFNIND-SQQLSFYIFMDQIPVINSTAKPFGATSAITVQWANDDILSYKRPNYS----LGTNSETELMGGSEVKMLLSKQTAYDTDKIDQIFLAYQL----------------LEPVWAMKVNGKIVPITKDL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85596 for 2775 contacts (-30.8/contact) +
2D Compatibility (PS) -37889 + (NN) -9453 + (LL) 6376
1D Compatibility (HY) -24000 + (ID) 2950
Total energy: -153512.0 ( -55.32 by residue)
QMean score : 0.442
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