Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELIGDKSTVQQAIHALQLIGFENVKSYRLPQTNIVTSSIHSSEMTGEEHNVLDVRNDDEWRKGHLKQAIHIPHGKLLNE--DIPFDKNDLIYVHCQSGVRSSIAVGILEYKGFTNIVNVRGGYQHLPAFLK
4OCG Chain:B ((485-559))
-----------------------------------------------EDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHELPKDKEIIIF--CQVGLRGNVAYRQLVNNGY-RARNLIGGYR-------
General information:
TITO was launched using:
RESULT:
Template:
4OCG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38212 for 524 contacts (-72.9/contact) +
2D Compatibility (PS) -7789 + (NN) -1255 + (LL) 4368
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -49888.0 ( -95.21 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_4OCG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OCG-query.scw
PDB file :
Tito_Scwrl_4OCG.pdb
: