Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVNLLVKSK
4ADZ Chain:B ((55-111))
-------LKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFALQLLEEHLRHCVADA----------------------
General information:
TITO was launched using:
RESULT:
Template:
4ADZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1904 for 271 contacts (-7.0/contact) +
2D Compatibility (PS) -5834 + (NN) -157 + (LL) 2236
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -12359.0 ( -45.61 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_4ADZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ADZ-query.scw
PDB file :
Tito_Scwrl_4ADZ.pdb
: