Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPTVVIDLVDQLKGNYSIKLILEVLNIPKSTYYRWKNKTYKN-----------------DTVTQKVIELCEANHYTYGYRKITALINQCY----TSPINHKRVQRMMQKHHLNCRVRPKKTTRIGKPYYKTDNLLQR
1K78 Chain:A ((34-142))
-PDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQN-PTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTK---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49994 for 510 contacts (-98.0/contact) +
2D Compatibility (PS) -9385 + (NN) -1462 + (LL) 1704
1D Compatibility (HY) -800 + (ID) 600
Total energy: -60537.0 ( -118.70 by residue)
QMean score : 0.683
(partial model without unconserved sides chains):
PDB file :
Tito_1K78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K78-query.scw
PDB file :
Tito_Scwrl_1K78.pdb
: