Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKYYTKEEVVISTLQTLASKFEDLDIDSHD--NLNSFKARIG-STIDKLAKAPPLNKYTFTELMIIISIIYF-KNLYIGRLDKPSSRKKKGGNLIFEIVYN--NQMLNSSTAKL-------------------------
3H16 Chain:A ((18-153))
-----APPHDIFISHAWEDKADFVEALAHTLRAAGAEVWYDDFSLRPGDSLRRSIDKGLGSSRFGIVVLSTHFFKKEWPQKELDGLFQLESSGRSRILPIWHKVSKDEVASFSPTMADKLAFNTSTKSVDEIVADLMAIIR
General information:
TITO was launched using:
RESULT:
Template:
3H16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25339 for 734 contacts (-34.5/contact) +
2D Compatibility (PS) -11150 + (NN) 208 + (LL) 416
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -37765.0 ( -51.45 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_3H16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H16-query.scw
PDB file :
Tito_Scwrl_3H16.pdb
: