Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYDKKMINRINRIQGQLNGIIKMMEEGKDCKDVITQIS-ASKSSLQRLMGIIISENLIECVKVAADDEESSQELINEAVNLLVKSK
3HUG Chain:B ((25-55))
-------------------------------HHYAMWDAAYVLGALSAADRREFEAHLAGCP-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8090 for 140 contacts (-57.8/contact) +
2D Compatibility (PS) -3005 + (NN) 891 + (LL) 4164
1D Compatibility (HY) 1200 + (ID) 150
Total energy: -4990.0 ( -35.64 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3HUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HUG-query.scw
PDB file :
Tito_Scwrl_3HUG.pdb
: