Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKRVNKLVLGISFLFLIISIFAGCGTGKEAEIKKSFEK---TLSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIVRSSMSIQSNGKDMNIKGMVLYMNRNTRTTNGYYYVDVIEREDKGIHRDNEKRYPVKMVDNKIIPTKEIKDEKIKKEIENFKFFVQYGDFKDLSKYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYNIPTNKAPKLLLKGTGNLKGSSIGYKKIEFTFVEKKGENIYFSDGLHFNPSEDK |
2UVQ Chain:A ((24-237)) | --------------RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDF----VTHSRLPETTVVYPADVVLFEGILV----FYSQEIRDMF-HLRLFVDTDSDVRLSRRVLRDVRDLEQILTQYTT--------FVKPAFEEFCLPTKKYADVIIPRGVD---NMVAINLIVQHIQDILNGDI-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 62061 for 1561 contacts (39.8/contact) +
2D Compatibility (PS) -21721 + (NN) -3417 + (LL) 2640
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: 33463.0 ( 21.44 by residue)
QMean score : 0.142
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