Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLNTLVLYISFLILIISIVAGCGTGKEAEIKKSFEKTLSMYPIKNLEDLYDKEGYRDDEFDKNDKGTWTISSEMAIQKKGEALNIKGMVLKLNRNTRSAKGFYYVNAIKKDE-------NGRPQDKQIEYPVKMIDNKIIPTKDIKDEKIKKEIENFKFFAQYGNFKDLTKYKGGDISYNPEAPIYSAKYQLTNDDYNVKQLRKRY-----------DIPTNKAPKLLLKGSGNLDGSSIGYKKIEFTFVEKKGENTYFTANLHFKPSNDE |
| 3TD7 Chain:A ((35-295)) | HNGLITKIWGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDV-----LPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNNKLEVDYGLSYEDVVNKYESFRAKCGKVTPLDHKAFSFKKLYYMDAPIVSLDKVENFVRIARMRGISDKYFAFLELATVLNGDFNELKKQS--SWEYRNKYAQKKIRHMRENAIPSIEEQGYWKGTPTIDELKLLLFLASNLN----------RTEVNDAINNVERLESTHYIEN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 61929 for 1610 contacts (38.5/contact) +
2D Compatibility (PS) -24684 + (NN) -4319 + (LL) 876
1D Compatibility (HY) 400 + (ID) 1850
Total energy: 32352.0 ( 20.09 by residue)
QMean score : 0.138
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