Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKEDKMIEIRRYLHQHPELSFHEDETAKYIAEFYKGKDVEVET-NVGPRGIKVTIDSGKP-GKTLAIRADFDALPITEDTGLSFASQNKGVMHACGH---DAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGVLDGVDHVLGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHGSSPHMANDAIVAGSYFVTALQTVVSRRLSPFETGVVTIGSFDGKG-QFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGVTCTLEYNDDYPALYNDPEFTEYVAKTLKEANLDFGVE--MCEPQPPSEDFAYYAKERPSAFIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN |
| 1YSJ Chain:A ((26-402)) | -------ADKAFHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKG-REDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQR---RAELKGTVRFIFQPAEEIA-AGARKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGK--------NSIDPIAAAGQIISG-----------LQNAVVSITRVQA-GTSWNVIPDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKWFPYLPSVQNDGTFLNAASEAAAR----LGYQTVHAEQSPGGEDFALYQEKIPGFFVWMGTNGT----EEWHHPAFTLDEEALTVASQYFAELAVIVLET-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -157214 for 2987 contacts (-52.6/contact) +
2D Compatibility (PS) -37770 + (NN) -18634 + (LL) 1416
1D Compatibility (HY) -20400 + (ID) 5600
Total energy: -238202.0 ( -79.75 by residue)
QMean score : 0.542
|
|
|