Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKLRDTTFLS-YLFTIILWGS--AFPMIKIALNDFSAESLSAFRLILA------TIILLPFVIIKKLPTP-------------ELRDI-----PVIFILGFCGFV-------IYHTALNFGETLISAGISGILVSTT-------PIFSSALAYIFLKEHFSKWNWLSSLVAFIG---------ISIISISKDDYTTINVLGVFIILLASFSESLYFTFQKKYIEKYGFIAFTL---YTIMASSPFMLIFIPEIINDIHGA-TFTSIVSVLYLAIFP-TIIPYVLLAYIVKSV--GVSDATMSLYLTPIVSLLLSYLLLDELPTTLAII-GGIITLLGVSLSNFFQNT------------------------------- |
2I71 Chain:A ((19-398)) | --------FQGMASIVFSTIGNPKGYQKVTYEIDGEKFESNVSVLALRDLLKVDKTVVILGISVADVYNCKYADYRSCKECIIQNSKNDLGISESYVVAPNVYQKFKGKPDHYFTYIYYHSLRILEKEGINEVFIDTTHGINYMGVLAKEAIQLAVSAYAAKSEKEVKVSLYNSDPVGKDVSDTVKLHEIEAIKISPLSGLKYVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIYLSEKDSSLHLKRLEDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVTRAIIENEVDKIEKYQMGSERKLLGEYMRILYAHGGLPYAGTYVYKEKDKVYVTYGDKIDEIERQI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -349820 for 2083 contacts (-167.9/contact) +
2D Compatibility (PS) -30219 + (NN) -6939 + (LL) 496
1D Compatibility (HY) -8000 + (ID) 1500
Total energy: -395982.0 ( -190.10 by residue)
QMean score : 0.337
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