Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERVTLFDQIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITS--QNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLLAQVNQLLADKDHLHLVFE |
| 1HSJ Chain:A ((378-486)) | -----------------------------------------------------------------------------------------------------------------------------------DINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRSESN--EISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQKLISELEEYIK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66411 for 688 contacts (-96.5/contact) +
2D Compatibility (PS) -11268 + (NN) -2893 + (LL) 12640
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -72882.0 ( -105.93 by residue)
QMean score : 0.567
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