Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MLLKPKYQIVIAGL-----CLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDLHDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVIAFLGAIVVTILVVALGMFRQTLFSPHRVILAGA--------AIAMLFTAFTQGILIMNETDLQGLLFWLSGSVSLRN------------------------------IWDIPWIIPLVLILILIAFSMAAHINILMTSDDI-----ATGLGQNIKLIKW-------------MIIMLI---------SMLAGISVAVAGSIVFVGLIVPNISKRLLP-----------PNYKYLIPFTALAGA-ILMIISDIVARIIIKPLELPIGVVTAVIGAIVLIYIMKKGRQRL------------------ |
| 4EPQ Chain:A ((34-472)) | DYQFPLPQKNSELWIIQKKTLQDLSSGKQKLDSFQSLESILEILRD----SKNQNDEKYFNLKAVFEQLDKEEQTYFLEQFIPKICQLVLKIKK--KQLKNQIPKESKIYEAAFSREEISYYVSCMFLCILKDQDRKIYKDFRLIYLKDLVQQINIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQRINCGQLEDYENWVDKLKAIKLKNVQLTDDKLIEDFPGTLQVDFANCDIGGGILGNGLVQEEIRFCVCPEMLVSLLVFDQSMEANEVIIMKGIKQYSDYQGYSNSFRFVKMGNSKIQKQKRTNPQTILAIDALCFNSSDNQFSEVNVSRELNKSYMGFKQEDQLKTISTGKWGCGAFLGVFDLKFAIQWIASSRSNKKMIICTFQDEQTTKQIQQVFDLYKQKNASIFLKLVMDYPNSKYMEDYTLLEYLIELGKEKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -320179 for 2382 contacts (-134.4/contact) +
2D Compatibility (PS) -32803 + (NN) 3505 + (LL) 692
1D Compatibility (HY) -11600 + (ID) 2650
Total energy: -363035.0 ( -152.41 by residue)
QMean score : 0.193
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