Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFS--EACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISI-----MDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY |
| 3HDJ Chain:A ((3-308)) | ---AMLHIDDAMIEDAV--TPQAAQEVLHAAFLDFGRGSAAMQRRVRTEA------GGVKLSTLGAVIPG-QGVAGAKVYTTIKGQF--------QFVILLFSAADGRPLATCDAGTLTRKRTAACTVLAAGALARPRSSVLGLFGAGTQGAEHAAQLSARF-ALEAILVHDPYASPEILERIGRRC-----GVPA-RMAAPADIAAQADIVVTATRSTTPLFAGQALRAGAFVGAIGSSLPHTRELDDEALRRARAVVVEWREQTLSEAGDLVLAAPDTGL--DAKVVELADVLAGRAAARQADEDIVIYKSVGVGLEDVALAGYAYRRLAAQR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187161 for 2658 contacts (-70.4/contact) +
2D Compatibility (PS) -32600 + (NN) -13215 + (LL) 1356
1D Compatibility (HY) -9200 + (ID) 3300
Total energy: -244120.0 ( -91.84 by residue)
QMean score : 0.467
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