Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLQLKKWKCRENDIEAVHNNKGYAYQRKLDALEEVRKGYYPIKRAIDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKL--RSMCKNAEKNGAQWADKDDDRITNVGKF-IRKTRIDELPQLINVVK---GEMSFIGPRPERPEF--VELFSSEVI--GFEQRCLVTP-GLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEGSR |
| 4Q28 Chain:A ((2-111)) | -----------------------------------------------------------------------------------------GHHHHHHSHMRRSIVVIHPDTGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAQYDRYVNKDMSIQELAVLVSG------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3559 for 579 contacts (-6.1/contact) +
2D Compatibility (PS) -10508 + (NN) -761 + (LL) 11204
1D Compatibility (HY) 0 + (ID) 1100
Total energy: -4724.0 ( -8.16 by residue)
QMean score : 0.188
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