Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENQHNSKLLTLLLIGLAVFIQQSSVIAGVNVSIADFITLLILVYLLFFANHLLKANHFLQFFIILYTYRMIITLCLLFFDDLIFITVKEVLASTVKYAFVVIYFYLGMIIFKLGNSKKVIVTSYIISSVTIGLFCIIAGLNKSPLLMKLLYFDEIRSKGLMNDPNYFAMTQIITLVLAYKYIHNYIFKVLACGILLWSLTTTGSKTAFIILIVLAIYFFIKKLFSRNAVSVVSMLVIMLILLCFTFYNINYYLFQLSDLDAVP-SLDRMASIFEEGFASLNDSGSERSVVWINAILVIKYTLGFGVGLVDYVHIGSQINGILLVAHNTYLQIFAEWGILFGALFIIFMLYLLFELFRFNISGKNVTAIVVMLTMLIYFLTVSFNNSRYVAFILGIIVFIVQYEKMERDRNEE- |
4N5H Chain:X ((1-315)) | --MADEEAMLAKVQASWAQTAARDKARYADERVPEDVHWETEYRY-----EQSADPQQTLNLYYPAKRRNATMPTVIDIHGGGWFYGDRNLNRNYCRYLASQGYAVMGM--------------------------------------------------GYRLLPDVDLRGQIQDIFASLRWLSHFGPQR---GFDLDHVLLTGDSAGGHLASLVACIQQSAELQELFGVSRVNFNFTLVALVCP--------VAEPSKLPEAAGDMSDMAAFYLDKLSG----GDQALVDHLNFSQVVK-----GLDLPPFMLIGGQNDSFYLQSQA-LLKVFDANHVTYTTKLWPASAGPHLK-HVFNVQ--------------------HWEWPESIETNLEMLRTFDALSKQQDQAEENE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -480961 for 2712 contacts (-177.3/contact) +
2D Compatibility (PS) -32013 + (NN) 5688 + (LL) 9172
1D Compatibility (HY) -800 + (ID) 2350
Total energy: -501264.0 ( -184.83 by residue)
QMean score : 0.239
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